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  5. Sam_g12312

Sam_g12312


Description : O-type thioredoxin *(Trx-O) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12312

Target Alias Description ECC score Gene Family Method Actions
Aob_g18934 TH8, ATH8 O-type thioredoxin *(Trx-O) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02335 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001041.23 ATTRX1, ATTRX H1, TRX1 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder output from all 47 species
Cre12.g554850 TRXH2, TRX2,... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
Ehy_g00478 ATH9, TH9, TRX H9 O-type thioredoxin *(Trx-O) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22348 ATO2, TO2 O-type thioredoxin *(Trx-O) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19887 ATO2, TO2 O-type thioredoxin *(Trx-O) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12737 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 86 172
No external refs found!