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  5. Sam_g12201

Sam_g12201


Description : regulatory protein *(MAS2) of rDNA transcription & original description: none


Gene families : OG0004955 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12201

Target Alias Description ECC score Gene Family Method Actions
Aob_g21695 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Ceric.24G045500.1 Ceric.24G045500 regulatory protein *(MAS2) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Dcu_g01465 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28220.1 LOC_Os09g28220 rDNA transcriptional regulator (MAS2) 0.01 OrthoFinder output from all 47 species
Pir_g10375 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Pp3c9_17960V3.1 Pp3c9_17960 No annotation 0.01 OrthoFinder output from all 47 species
Solyc11g071660.1.1 Solyc11g071660 rDNA transcriptional regulator (MAS2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009269 NKAP_C 417 515
No external refs found!