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  5. Sam_g12142

Sam_g12142


Description : voltage-gated potassium cation channel *(TPK/KCO) & original description: none


Gene families : OG0001075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12142
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00085560 TPK1, ATKCO1,... Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder output from all 47 species
Aop_g05601 TPK1, ATKCO1,... voltage-gated potassium cation channel *(TPK/KCO) &... 0.03 OrthoFinder output from all 47 species
Ceric.06G059200.1 ATTPK5, ATKCO5,... voltage-gated potassium cation channel *(TPK/KCO) &... 0.05 OrthoFinder output from all 47 species
Ceric.1Z110300.1 ATTPK5, ATKCO5,... voltage-gated potassium cation channel *(TPK/KCO) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01014662001 TPK1, ATKCO1,... Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder output from all 47 species
GSVIVT01021396001 TPK3, ATTPK3,... Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder output from all 47 species
MA_3606g0010 TPK3, ATTPK3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g14570 ATTPK5, ATKCO5,... voltage-gated potassium cation channel *(TPK/KCO) &... 0.02 OrthoFinder output from all 47 species
Ppi_g04446 TPK1, ATKCO1,... voltage-gated potassium cation channel *(TPK/KCO) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR013099 K_chnl_dom 354 422
IPR013099 K_chnl_dom 232 310
No external refs found!