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  5. Sam_g12026

Sam_g12026


Description : component *(CRN/MAC10) of non-snRNP MOS4-associated complex & original description: none


Gene families : OG0004678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004678_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12026

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00234420 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
AT5G41770 No alias crooked neck protein, putative / cell cycle protein, putative 0.04 OrthoFinder output from all 47 species
Ala_g08121 No alias component *(CRN/MAC10) of non-snRNP MOS4-associated... 0.02 OrthoFinder output from all 47 species
Als_g21795 No alias component *(CRN/MAC10) of non-snRNP MOS4-associated... 0.03 OrthoFinder output from all 47 species
Ceric.03G087800.1 Ceric.03G087800 component *(CRN/MAC10) of non-snRNP MOS4-associated... 0.05 OrthoFinder output from all 47 species
Cre14.g621000 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
GSVIVT01019497001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Gb_24869 No alias component CRN/MAC10 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species
LOC_Os05g22260.1 LOC_Os05g22260 component CRN/MAC10 of non-snRNP MOS4-associated complex 0.04 OrthoFinder output from all 47 species
Lfl_g02287 No alias component *(CRN/MAC10) of non-snRNP MOS4-associated... 0.02 OrthoFinder output from all 47 species
MA_218488g0010 No alias component CRN/MAC10 of non-snRNP MOS4-associated complex 0.01 OrthoFinder output from all 47 species
Solyc03g007850.1.1 Solyc03g007850 component CRN/MAC10 of non-snRNP MOS4-associated complex 0.01 OrthoFinder output from all 47 species
Solyc12g056080.2.1 Solyc12g056080 component CRN/MAC10 of non-snRNP MOS4-associated complex 0.07 OrthoFinder output from all 47 species
Spa_g12255 No alias component *(CRN/MAC10) of non-snRNP MOS4-associated... 0.02 OrthoFinder output from all 47 species
Zm00001e005158_P001 Zm00001e005158 component CRN/MAC10 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003107 HAT 206 234
No external refs found!