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  5. Sam_g11893

Sam_g11893


Description : not classified & original description: none


Gene families : OG0004119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11893

Target Alias Description ECC score Gene Family Method Actions
Aob_g04151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G001900.1 Ceric.36G001900 not classified & original description: pacid=50569030... 0.03 OrthoFinder output from all 47 species
Dac_g42738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022404001 No alias Protein OPAQUE10 OS=Zea mays 0.03 OrthoFinder output from all 47 species
LOC_Os03g49630.1 LOC_Os03g49630 Protein OPAQUE10 OS=Zea mays (sp|p0dkl2|op10_maize : 382.0) 0.03 OrthoFinder output from all 47 species
Spa_g08662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005388_P001 Zm00001e005388 Protein OPAQUE10 OS=Zea mays (sp|p0dkl2|op10_maize : 1937.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 376 420
No external refs found!