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  5. Sam_g11876

Sam_g11876


Description : not classified & original description: none


Gene families : OG0001946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11876

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00163180 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ceric.32G005500.1 Ceric.32G005500 not classified & original description: pacid=50598076... 0.03 OrthoFinder output from all 47 species
Dcu_g17270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425822g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g20890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026980 No alias not classified & original description: CDS=99-1424 0.02 OrthoFinder output from all 47 species
Zm00001e031365_P001 Zm00001e031365 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA

No InterPro domains available for this sequence

No external refs found!