Sam_g11843


Description : BBR/BPC-type transcription factor & original description: none


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11843
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Aop_g04585 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57842.t2 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03660 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009845001 BPC6, BBR/BPC6, ATBPC6 RNA biosynthesis.transcriptional activation.BBR/BPC... 0.04 OrthoFinder output from all 47 species
Nbi_g01837 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04762 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03032 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03348 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007727 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024024 BPC3, ATBPC3 BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc06g072370.3.1 BPC3, ATBPC3,... transcription factor (BBR/BPC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 1 314
No external refs found!