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  5. Sam_g11808

Sam_g11808


Description : not classified & original description: none


Gene families : OG0003230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003230_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11808
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Ala_g00504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G009300.1 Ceric.27G009300 not classified & original description: pacid=50605188... 0.03 OrthoFinder output from all 47 species
Nbi_g01746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017405 No alias not classified & original description: CDS=1-657 0.03 OrthoFinder output from all 47 species
Solyc12g015680.1.1 Solyc12g015680 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g06643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015705_P001 Zm00001e015705 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 60 202
No external refs found!