Sam_g11629


Description : subcluster CPL phosphatase & original description: none


Gene families : OG0002263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002263_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11629

Target Alias Description ECC score Gene Family Method Actions
AT4G21670 ATCPL1, CPL1, FRY2 C-terminal domain phosphatase-like 1 0.03 OrthoFinder output from all 47 species
Adi_g107291 ATCPL1, CPL1, FRY2 group-I RNA polymerase-II phosphatase & original... 0.02 OrthoFinder output from all 47 species
Ala_g07037 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14449 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G049400.1 ATCPL1, CPL1,... subcluster CPL phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G074800.1 ATCPL1, CPL1,... subcluster CPL phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g07780 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g63820.1 CPL2, ATCPL2,... RNA polymerase-II phosphatase. CPL phosphatase 0.03 OrthoFinder output from all 47 species
Mp4g06900.1 ATCPL1, CPL1, FRY2 RNA polymerase-II phosphatase. CPL phosphatase 0.02 OrthoFinder output from all 47 species
Msp_g07706 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12247 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06700 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015225_P001 ATCPL1, CPL1,... RNA polymerase-II phosphatase. CPL phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e019228_P002 CPL2, ATCPL2,... RNA polymerase-II phosphatase. CPL phosphatase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 858 916
IPR014720 dsRBD_dom 711 771
IPR004274 FCP1_dom 253 363
No external refs found!