Sam_g11582


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11582

Target Alias Description ECC score Gene Family Method Actions
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61689.t1 Aspi01Gene61689 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.02 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g33780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03731 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 629 678
IPR033646 CLU-central 541 628
No external refs found!