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  5. Sam_g11539

Sam_g11539


Description : not classified & original description: none


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11539
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00104470 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00263410 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.1 OrthoFinder output from all 47 species
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.05 OrthoFinder output from all 47 species
Adi_g077568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00459 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0006.g010000 No alias not classified & original description: CDS=138-950 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056596 No alias not classified & original description: CDS=77-799 0.05 OrthoFinder output from all 47 species
Ceric.06G023100.1 Ceric.06G023100 not classified & original description: pacid=50619513... 0.04 OrthoFinder output from all 47 species
Ceric.10G002400.1 Ceric.10G002400 not classified & original description: pacid=50611676... 0.04 OrthoFinder output from all 47 species
Ehy_g07387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
LOC_Os01g05010.1 LOC_Os01g05010 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38210.1 LOC_Os05g38210 Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.07 OrthoFinder output from all 47 species
LOC_Os08g34130.1 LOC_Os08g34130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g04606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00853 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.06 OrthoFinder output from all 47 species
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Nbi_g01706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c12_23320V3.1 Pp3c12_23320 Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006985 No alias not classified & original description: CDS=139-606 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009111 No alias not classified & original description: CDS=26-742 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014009 No alias not classified & original description: CDS=55-774 0.03 OrthoFinder output from all 47 species
Solyc03g117080.4.1 Solyc03g117080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g01691 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g09185 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e036951_P001 Zm00001e036951 Uncharacterized protein At2g39795, mitochondrial... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 58 251
No external refs found!