Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g11395 | |
Cluster | HCCA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g074297 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g24666 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g24680 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.13 | OrthoFinder output from all 47 species | |
Als_g08605 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g40043 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g50102 | BTI1, RTNLB1 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.1 | OrthoFinder output from all 47 species | |
Aspi01Gene63604.t1 | BTI1, RTNLB1,... | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g04424 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g11444 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.19G012300.1 | Ceric.19G012300 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g08192 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Gb_10741 | No alias | ER-associated protein (Reticulon) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g04640.1 | LOC_Os01g04640 | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g24770.1 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g47690.1 | LOC_Os05g47690 | ER-associated protein (Reticulon) | 0.01 | OrthoFinder output from all 47 species | |
Len_g26287 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Len_g56590 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.09 | OrthoFinder output from all 47 species | |
Msp_g38145 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g37965 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016413_P001 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027185_P001 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010639 | negative regulation of organelle organization | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0032392 | DNA geometric change | IEP | HCCA |
BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032780 | negative regulation of ATP-dependent activity | IEP | HCCA |
BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
CC | GO:0042555 | MCM complex | IEP | HCCA |
BP | GO:0043086 | negative regulation of catalytic activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043462 | regulation of ATP-dependent activity | IEP | HCCA |
BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0051095 | regulation of helicase activity | IEP | HCCA |
BP | GO:0051097 | negative regulation of helicase activity | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051129 | negative regulation of cellular component organization | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | HCCA |
BP | GO:1905463 | negative regulation of DNA duplex unwinding | IEP | HCCA |
BP | GO:1905774 | regulation of DNA helicase activity | IEP | HCCA |
BP | GO:1905775 | negative regulation of DNA helicase activity | IEP | HCCA |
BP | GO:2001251 | negative regulation of chromosome organization | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003388 | Reticulon | 79 | 233 |
No external refs found! |