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  5. Sam_g11106

Sam_g11106


Description : not classified & original description: none


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11106
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70838.t1 Aspi01Gene70838 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g042977 No alias not classified & original description: CDS=66-1103 0.02 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.05 OrthoFinder output from all 47 species
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11518 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g42800.1 LOC_Os04g42800 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Lfl_g01177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430747g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_173127g0010 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g063140.4.1 Solyc09g063140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 72 147
No external refs found!