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  5. Sam_g11104

Sam_g11104


Description : spindle assembly checkpoint protein *(MAD2) & original description: none


Gene families : OG0006342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11104

Target Alias Description ECC score Gene Family Method Actions
AT3G25980 MAD2 DNA-binding HORMA family protein 0.11 OrthoFinder output from all 47 species
Aev_g19678 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
Ala_g19589 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.16 OrthoFinder output from all 47 species
Als_g12979 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.06 OrthoFinder output from all 47 species
Aop_g02412 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.13 OrthoFinder output from all 47 species
Aspi01Gene47869.t1 MAD2, Aspi01Gene47869 spindle assembly checkpoint protein *(MAD2) & original... 0.02 OrthoFinder output from all 47 species
Ceric.39G059300.1 MAD2, Ceric.39G059300 spindle assembly checkpoint protein *(MAD2) & original... 0.07 OrthoFinder output from all 47 species
Dac_g10221 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.07 OrthoFinder output from all 47 species
Dac_g10764 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.08 OrthoFinder output from all 47 species
Dcu_g12404 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.15 OrthoFinder output from all 47 species
GSVIVT01010325001 MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.13 OrthoFinder output from all 47 species
Gb_04850 MAD2 MAD2 spindle assembly checkpoint protein 0.1 OrthoFinder output from all 47 species
LOC_Os04g40940.1 MAD2, LOC_Os04g40940 MAD2 spindle assembly checkpoint protein 0.1 OrthoFinder output from all 47 species
Len_g58649 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g13076 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
MA_19675g0010 MAD2 MAD2 spindle assembly checkpoint protein 0.05 OrthoFinder output from all 47 species
Mp6g18990.1 MAD2 MAD2 spindle assembly checkpoint protein 0.07 OrthoFinder output from all 47 species
Msp_g00312 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
Ore_g40517 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.05 OrthoFinder output from all 47 species
Smo111490 MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
Solyc05g014370.3.1 MAD2, Solyc05g014370 MAD2 spindle assembly checkpoint protein 0.04 OrthoFinder output from all 47 species
Spa_g52388 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003511 HORMA_dom 16 191
No external refs found!