Sam_g11082


Description : plant-specific stabilizing component *(ClpT) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0007488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007488_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11082

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00213590 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
AT4G12060 No alias Double Clp-N motif protein 0.05 OrthoFinder output from all 47 species
AT4G25370 No alias Double Clp-N motif protein 0.02 OrthoFinder output from all 47 species
Adi_g100657 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Als_g13387 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037001 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Dde_g16574 No alias plant-specific stabilizing component *(ClpT) of... 0.05 OrthoFinder output from all 47 species
Gb_11771 No alias plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14280.1 LOC_Os03g14280 plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species
MA_12551g0010 No alias plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species
MA_377212g0010 No alias plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
Mp6g19150.1 No alias plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species
Nbi_g08875 No alias plant-specific stabilizing component *(ClpT) of... 0.07 OrthoFinder output from all 47 species
Solyc08g079660.3.1 Solyc08g079660 plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 205 241
IPR004176 Clp_R_dom 117 169
No external refs found!