Cpa|evm.model.tig00000851.5


Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 8 (CNGC8)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000851.5
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.01 Gene family
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.01 Gene family
MA_10428782g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
Solyc11g069580.2.1 Solyc11g069580.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d053401 GRMZM2G148118 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 331 412
IPR005821 Ion_trans_dom 4 238
No external refs found!