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  5. Sam_g10755

Sam_g10755


Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10755

Target Alias Description ECC score Gene Family Method Actions
AT4G18100 No alias Ribosomal protein L32e 0.04 OrthoFinder output from all 47 species
AT5G46430 No alias Ribosomal protein L32e 0.05 OrthoFinder output from all 47 species
Adi_g018845 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Adi_g126327 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g06477 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g32062 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ala_g37942 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g10549 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g00438 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g00898 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g13748 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22038.t1 Aspi01Gene22038 component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024411 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0061.g035078 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g21008 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.22G081000.1 Ceric.22G081000 component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.39G032400.1 Ceric.39G032400 component *(eL32) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.140 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Cre06.g289550 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Dac_g04434 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dac_g27003 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g24494 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g35048 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g35080 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dde_g04107 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g18228 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01005150001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01021377001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Gb_36437 No alias component RPL32 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os08g41300.1 LOC_Os08g41300 component RPL32 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os09g32500.1 LOC_Os09g32500 component RPL32 of LSU proteome component 0.07 OrthoFinder output from all 47 species
LOC_Os09g32520.1 LOC_Os09g32520 component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species
MA_41569g0010 No alias component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp7g12480.1 No alias component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Msp_g34354 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Msp_g35436 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ore_g41192 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g61740 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_32490V3.1 Pp3c1_32490 Ribosomal protein L32e 0.02 OrthoFinder output from all 47 species
Pp3c2_9590V3.1 Pp3c2_9590 Ribosomal protein L32e 0.06 OrthoFinder output from all 47 species
Sam_g12910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g30727 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g30905 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo146656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc02g070310.3.1 Solyc02g070310 component RPL32 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc08g006900.3.1 Solyc08g006900 component RPL32 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Spa_g11641 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Spa_g17123 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g21119 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g36775 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g41176 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Zm00001e003623_P002 Zm00001e003623 component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e010105_P002 Zm00001e010105 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e021938_P001 Zm00001e021938 component RPL32 of LSU proteome component 0.08 OrthoFinder output from all 47 species
Zm00001e034604_P001 Zm00001e034604 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e034606_P001 Zm00001e034606 component RPL32 of LSU proteome component 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 16 122
No external refs found!