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  5. Sam_g10590

Sam_g10590


Description : microtubule-stabilizing factor *(WDL) & original description: none


Gene families : OG0000418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10590
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT2G25480 No alias TPX2 (targeting protein for Xklp2) protein family 0.02 OrthoFinder output from all 47 species
Adi_g059112 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g079396 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g33020 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g25469 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Als_g05641 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Als_g15327 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Als_g29272 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aob_g32079 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g60287 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11564.t1 Aspi01Gene11564 microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11565.t1 Aspi01Gene11565 microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23125.t1 Aspi01Gene23125 microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013383 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044176 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Cba_g22621 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g57618 No alias microtubule-stabilizing factor *(WDL) & original... 0.01 OrthoFinder output from all 47 species
Ceric.02G109600.1 Ceric.02G109600 microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G023300.1 Ceric.37G023300 microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g22186 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g03076 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g11946 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g07182 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01370 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04896 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015552001 No alias Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
GSVIVT01018122001 No alias Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
Gb_12105 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Gb_32183 No alias microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10690.1 LOC_Os02g10690 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58480.1 LOC_Os03g58480 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
LOC_Os11g36340.1 LOC_Os11g36340 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Len_g01303 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Len_g24149 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Len_g31668 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g29480 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
MA_46848g0010 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Mp7g06100.1 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Msp_g07370 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g09168 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g24171 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Pir_g18861 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g28684 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004308 No alias not classified & original description: CDS=354-1142 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009920 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013255 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014818 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Solyc08g059800.3.1 Solyc08g059800 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Solyc09g083400.3.1 Solyc09g083400 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Solyc10g081730.2.1 Solyc10g081730 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Spa_g04292 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g39672 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g47611 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Tin_g10441 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g13057 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g45028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006019_P002 Zm00001e006019 microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
Zm00001e011232_P006 Zm00001e011232 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Zm00001e021245_P001 Zm00001e021245 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Zm00001e030579_P001 Zm00001e030579 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 302 372
No external refs found!