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  5. Sam_g10548

Sam_g10548


Description : component *(SWIB) of SWI-B chromatin-remodeling complexes & original description: none


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10548

Target Alias Description ECC score Gene Family Method Actions
AT4G26810 No alias SWIB/MDM2 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G34290 No alias SWIB/MDM2 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g30985 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g42634 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g43986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00052 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.02 OrthoFinder output from all 47 species
Msp_g00952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02930 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 55 125
No external refs found!