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  5. Sam_g10418

Sam_g10418


Description : E3 ubiquitin ligase *(SR1) & original description: none


Gene families : OG0001832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10418

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00184570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Als_g12075 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g38780.1 LOC_Os01g38780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_137330g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g068390.3.1 Solyc01g068390 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e000695_P002 Zm00001e000695 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!