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  5. Sam_g10404

Sam_g10404


Description : regulatory protein *(CYCL) of cell cycle & original description: none


Gene families : OG0001825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10404

Target Alias Description ECC score Gene Family Method Actions
Aev_g42660 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aob_g12221 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dcu_g06939 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dcu_g35972 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ehy_g31861 RCY1, ATRCY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020870001 RCY1, ATRCY1 Cell cycle.regulation.cyclins.CYCL-type cyclin 0.03 OrthoFinder output from all 47 species
Mp3g11260.1 RCY1, ATRCY1 cyclin (CYCL) 0.01 OrthoFinder output from all 47 species
Msp_g41730 RCY1, ATRCY1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12145 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Solyc01g098350.3.1 RCY1, ATRCY1,... cyclin (CYCL) 0.02 OrthoFinder output from all 47 species
Tin_g01991 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004835_P004 RCY1, ATRCY1,... cyclin (CYCL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 10 147
No external refs found!