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  5. Sam_g10294

Sam_g10294


Description : class II ARF-GAP ARF-GTPase-activating protein & original description: none


Gene families : OG0001922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10294

Target Alias Description ECC score Gene Family Method Actions
AT4G17890 AGD8 ARF-GAP domain 8 0.04 OrthoFinder output from all 47 species
Adi_g064067 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.06 OrthoFinder output from all 47 species
Aev_g42782 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
Ala_g01748 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Als_g00881 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Aop_g38745 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Ceric.01G027900.1 AGD8, Ceric.01G027900 class II ARF-GAP ARF-GTPase-activating protein &... 0.09 OrthoFinder output from all 47 species
Dac_g14431 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Dcu_g04662 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Ehy_g05545 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Ehy_g05757 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Ehy_g11258 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63710.1 AGD8, LOC_Os03g63710 class II ARF-GAP ARF-GTPase-activating protein 0.04 OrthoFinder output from all 47 species
Len_g55685 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Lfl_g36558 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Solyc08g005070.4.1 AGD8, Solyc08g005070 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Spa_g19347 AGD9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011636_P001 AGD9, Zm00001e011636 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 95 196
No external refs found!