Sam_g10143


Description : not classified & original description: none


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00251650 evm_27.TU.AmTr_v1... UPF0496 protein 4 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Adi_g024369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G032500.1 Ceric.22G032500 not classified & original description: pacid=50614109... 0.02 OrthoFinder output from all 47 species
Ceric.27G016500.1 Ceric.27G016500 not classified & original description: pacid=50605586... 0.03 OrthoFinder output from all 47 species
Dcu_g42208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g59140.1 LOC_Os04g59140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_16561g0010 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pnu_g09502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00919 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005897 No alias not classified & original description: CDS=1-1284 0.03 OrthoFinder output from all 47 species
Solyc01g104660.3.1 Solyc01g104660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g056550.1.1 Solyc12g056550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g18331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25384 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004370_P001 Zm00001e004370 UPF0496 protein 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008511 ROH1-like 208 356
IPR008511 ROH1-like 41 193
No external refs found!