1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g10123

Sam_g10123


Description : solute transporter *(MTCC) & original description: none


Gene families : OG0000680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10123

Target Alias Description ECC score Gene Family Method Actions
Cba_g38068 ATMBAC2, BAC2 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001024.11 ATNDT2, NDT2 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
Cre16.g683259 ATMBAC2, BAC2 Solute transport.carrier-mediated transport.MC-type... 0.01 OrthoFinder output from all 47 species
Len_g07417 BOU solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18401 ATMBAC1, MBAC1 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12247 BOU solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g009090.3.1 ATMBAC1, MBAC1,... arginine/ornithine transporter. solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Tin_g06709 BOU solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 7 96
IPR018108 Mitochondrial_sb/sol_carrier 110 168
No external refs found!