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  5. Sam_g10107

Sam_g10107


Description : not classified & original description: none


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263410 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
AT2G41600 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.05 OrthoFinder output from all 47 species
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.06 OrthoFinder output from all 47 species
AT5G05990 No alias Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Ala_g15202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G023100.1 Ceric.06G023100 not classified & original description: pacid=50619513... 0.04 OrthoFinder output from all 47 species
Ceric.10G002400.1 Ceric.10G002400 not classified & original description: pacid=50611676... 0.05 OrthoFinder output from all 47 species
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.09 OrthoFinder output from all 47 species
Gb_30186 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os01g05010.1 LOC_Os01g05010 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os08g34130.1 LOC_Os08g34130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g15788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427007g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.07 OrthoFinder output from all 47 species
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Nbi_g00567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016932_P001 Zm00001e016932 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Zm00001e036951_P001 Zm00001e036951 Uncharacterized protein At2g39795, mitochondrial... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 74 261
No external refs found!