Sam_g10020


Description : not classified & original description: none


Gene families : OG0006632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006632_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10020
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G27180 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Ala_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0288.g063238 No alias not classified & original description: CDS=107-2203 0.03 OrthoFinder output from all 47 species
Ceric.04G110700.1 Ceric.04G110700 not classified & original description: pacid=50631634... 0.03 OrthoFinder output from all 47 species
Dac_g13654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g69120.1 LOC_Os01g69120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011875 No alias not classified & original description: CDS=25-1917 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!