- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(uL10) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0002053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002053_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00231170 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | OrthoFinder output from all 47 species | |
| AT3G09200 | No alias | Ribosomal protein L10 family protein | 0.27 | OrthoFinder output from all 47 species | |
| AT3G11250 | No alias | Ribosomal protein L10 family protein | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g013157 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017387 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g31921 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g01443 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13520 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene70147.t1 | Aspi01Gene70147 | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0024.g020356 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.18G048600.1 | Ceric.18G048600 | component *(uL10) of large ribosomal-subunit (LSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000615.69 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | OrthoFinder output from all 47 species | |
| Cre12.g520500 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | OrthoFinder output from all 47 species | |
| Dac_g01446 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g00958 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g24985 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01016313001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032857001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_29821 | No alias | 60S acidic ribosomal protein P0 OS=Glycine max... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g03640.1 | LOC_Os08g03640 | component RPP0 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os12g03880.1 | LOC_Os12g03880 | component RPP0 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| Len_g16154 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| MA_10433058g0020 | No alias | component RPP0 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g06170.1 | No alias | component RPP0 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g07120.1 | No alias | component RPP0 of LSU proteome component | 0.24 | OrthoFinder output from all 47 species | |
| Nbi_g05238 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06033 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g10636 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g44948 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g44949 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07774 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c11_3700V3.1 | Pp3c11_3700 | Ribosomal protein L10 family protein | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c1_8280V3.1 | Pp3c1_8280 | Ribosomal protein L10 family protein | 0.12 | OrthoFinder output from all 47 species | |
| Ppi_g22136 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29825 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005433 | No alias | component *(cpTatC) of thylakoid membrane Tat... | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008845 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g06149 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g06150 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g12721 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Smo149765 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Smo437282 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g054580.3.1 | Solyc05g054580 | component RPP0 of LSU proteome component | 0.17 | OrthoFinder output from all 47 species | |
| Spa_g56101 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g14132 | No alias | component *(uL10) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021786_P001 | Zm00001e021786 | component RPP0 of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Zm00001e029292_P001 | Zm00001e029292 | component RPP0 of LSU proteome component | 0.16 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |