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  5. Sam_g09796

Sam_g09796


Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09796

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270130 AFB3,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Aev_g48573 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g07454 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dac_g08213 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ore_g13712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc09g074520.3.1 TIR1, Solyc09g074520 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 18 57
IPR041101 Transp_inhibit 79 123
No external refs found!