1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g09786

Sam_g09786


Description : not classified & original description: none


Gene families : OG0004324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09786
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00135010 evm_27.TU.AmTr_v1... Cold shock protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g033243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G021500.1 Ceric.10G021500 not classified & original description: pacid=50612055... 0.02 OrthoFinder output from all 47 species
Cre01.g013800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g22621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_101073g0010 No alias Cold shock protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g27466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g073810.4.1 Solyc06g073810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g42088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 160 175
IPR001878 Znf_CCHC 200 216
IPR001878 Znf_CCHC 309 325
No external refs found!