Sam_g09704


Description : component *(GatB) of glutamyl-tRNA-dependent amidotransferase complex & original description: none


Gene families : OG0003791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003791_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09704
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00150510 GATB,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
AT1G48520 GATB GLU-ADT subunit B 0.06 OrthoFinder output from all 47 species
Als_g13549 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Aob_g15473 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g03519 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Ceric.1Z079300.1 GATB, Ceric.1Z079300 component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Cre14.g627488 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.02 OrthoFinder output from all 47 species
Dac_g09585 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g02738 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01027937001 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027938001 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
LOC_Os11g34210.2 GATB, LOC_Os11g34210 component GatB of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Len_g18271 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Lfl_g11055 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
MA_889802g0010 GATB component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Mp1g29210.1 GATB component GatB of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Nbi_g13336 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Ppi_g01136 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Smo120349 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Solyc09g090840.3.1 GATB, Solyc09g090840 component GatB of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Spa_g37335 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 89 381
IPR018027 Asn/Gln_amidotransferase 420 567
No external refs found!