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  5. Sam_g09606

Sam_g09606


Description : mechanosensitive cation channel *(MCA) & original description: none


Gene families : OG0002415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002415_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09606

Target Alias Description ECC score Gene Family Method Actions
Aev_g48122 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Ala_g01696 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Als_g14909 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Als_g51087 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Aop_g05446 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene45804.t1 MCA1, Aspi01Gene45804 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0316.g064349 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G065900.1 MCA1, Ceric.03G065900 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Gb_16864 MCA1 mechanosensitive cation channel (MCA) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34970.1 LOC_Os06g34970 Cell number regulator 13 OS=Zea mays... 0.01 OrthoFinder output from all 47 species
LOC_Os11g44870.1 MCA1, LOC_Os11g44870 Cell number regulator 13 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Len_g58792 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
MA_191168g0010 MCA2 Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_424555g0010 MCA1 mechanosensitive cation channel (MCA) 0.02 OrthoFinder output from all 47 species
MA_6161g0010 MCA1 Cell number regulator 13 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Mp5g19510.1 MCA1 mechanosensitive cation channel (MCA) 0.02 OrthoFinder output from all 47 species
Msp_g20081 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001243 MCA1 not classified & original description: CDS=164-2053 0.03 OrthoFinder output from all 47 species
Spa_g06407 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 307 404
IPR045766 MCAfunc 26 166
No external refs found!