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  5. Sam_g09529

Sam_g09529


Description : medium subunit mu of AP-1 trans-Golgi network cargo adaptor complex & original description: none


Gene families : OG0003200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09529

Target Alias Description ECC score Gene Family Method Actions
Als_g08881 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Aop_g02146 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020466 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036494 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ehy_g19498 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
LOC_Os01g50770.1 HAP13, LOC_Os01g50770 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46550.1 HAP13, LOC_Os05g46550 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Solyc04g026360.3.1 HAP13, Solyc04g026360 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g026380.4.1 HAP13, Solyc04g026380 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g013340.3.1 HAP13, Solyc05g013340 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Zm00001e020037_P003 HAP13, Zm00001e020037 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 159 426
IPR022775 AP_mu_sigma_su 7 127
No external refs found!