Sam_g09391

Description : EC_4.2 carbon-oxygen lyase & original description: none

Gene families : OG0003723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003723_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g09391

Target	Alias	Description	ECC score	Gene Family Method
Als_g33774	EMB1144	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00576	EMB1144	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Cre03.g145747	EMB1144	Amino acid metabolism.biosynthesis.shikimate...	0.02	OrthoFinder output from all 47 species
Lfl_g17150	EMB1144	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Mp3g00560.1	EMB1144	chorismate synthase	0.02	OrthoFinder output from all 47 species
Solyc04g049350.4.1	EMB1144, Solyc04g049350	chorismate synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004107	chorismate synthase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000453	Chorismate_synth	60	407

External Links

No external refs found!

Sam_g09391

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation