Sam_g09226

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g09226

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g36740.1	LOC_Os02g36740	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Solyc04g007600.4.1	Solyc04g007600	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species
Zm00001e017493_P001	Zm00001e017493	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	88	203
IPR011016	Znf_RING-CH	35	81

External Links

No external refs found!