Sam_g09064


Description : motility factor *(CHUP) & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09064

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00070270 CHUP1,... Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.05 OrthoFinder output from all 47 species
AT3G25690 CHUP1 Hydroxyproline-rich glycoprotein family protein 0.03 OrthoFinder output from all 47 species
Adi_g056481 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13466 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22592 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05340 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03133.t1 CHUP1, Aspi01Gene03133 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046122 CHUP1 motility factor *(CHUP) & original description: CDS=88-3033 0.02 OrthoFinder output from all 47 species
Ceric.25G018000.1 CHUP1, Ceric.25G018000 motility factor *(CHUP) & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g48663 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07086 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008227001 CHUP1 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011966001 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.06 OrthoFinder output from all 47 species
Gb_27995 CHUP1 motility factor (CHUP) 0.04 OrthoFinder output from all 47 species
LOC_Os11g01439.1 CHUP1, LOC_Os11g01439 motility factor (CHUP) 0.05 OrthoFinder output from all 47 species
LOC_Os12g01449.1 CHUP1, LOC_Os12g01449 motility factor (CHUP) 0.04 OrthoFinder output from all 47 species
Lfl_g04239 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15601 CHUP1 motility factor *(CHUP) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04962 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27545 CHUP1 motility factor *(CHUP) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g17440 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30546 CHUP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33216 CHUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12610 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02408 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35111 No alias motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo438117 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.04 OrthoFinder output from all 47 species
Smo438203 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.03 OrthoFinder output from all 47 species
Solyc05g009930.3.1 CHUP1, Solyc05g009930 motility factor (CHUP) 0.04 OrthoFinder output from all 47 species
Tin_g21079 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032505_P001 CHUP1, Zm00001e032505 motility factor (CHUP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004359 glutaminase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!