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  5. Sam_g09060

Sam_g09060


Description : component *(eIF-iso4G) of eIF-iso4F unwinding complex & original description: none


Gene families : OG0001378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09060

Target Alias Description ECC score Gene Family Method Actions
Aev_g05485 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Aob_g07389 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Aob_g07404 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.5 CUM2, EIF4G Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.03 OrthoFinder output from all 47 species
Ehy_g24667 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os02g39840.1 eIFiso4G1, LOC_Os02g39840 component eIF-iso4G of eIF-iso4F unwinding complex 0.02 OrthoFinder output from all 47 species
Pp3c17_18640V3.1 eIFiso4G1, Pp3c17_18640 MIF4G domain-containing protein / MA3 domain-containing protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024193 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e007677_P001 eIFiso4G1, Zm00001e007677 component eIF-iso4G of eIF-iso4F unwinding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 638 747
IPR003890 MIF4G-like_typ-3 218 442
No external refs found!