Cpa|evm.model.tig00020912.24


Description : 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0002028 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002028_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020912.24
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00228230 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
AT1G78630 emb1473 Ribosomal protein L13 family protein 0.03 Archaeplastida
Cre06.g264350 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Cre09.g405200 No alias Protein biosynthesis.organelle translation... 0.01 Archaeplastida
GSVIVT01014101001 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Gb_28095 No alias component psRPL13 of large ribosomal subunit proteome 0.04 Archaeplastida
LOC_Os01g54540.1 No alias component psRPL13 of large ribosomal subunit proteome 0.04 Archaeplastida
MA_10433400g0010 No alias component psRPL13 of large ribosomal subunit proteome 0.02 Archaeplastida
MA_109054g0010 No alias component mtRPL13 of large ribosomal subunit proteome 0.02 Archaeplastida
Mp3g07030.1 No alias component psRPL13 of large ribosomal subunit proteome 0.04 Archaeplastida
Mp8g16920.1 No alias component mtRPL13 of large ribosomal subunit proteome 0.01 Archaeplastida
Pp3c1_3220V3.1 No alias Ribosomal protein L13 family protein 0.02 Archaeplastida
Pp3c20_2980V3.1 No alias Ribosomal protein L13 family protein 0.04 Archaeplastida
Smo7665 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Solyc07g062190.4.1 No alias component psRPL13 of large ribosomal subunit proteome 0.04 Archaeplastida
Solyc12g014390.3.1 No alias component psRPL13 of large ribosomal subunit proteome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 72 105
IPR005822 Ribosomal_L13 112 158
No external refs found!