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  5. Sam_g08924

Sam_g08924


Description : component *(PWR) of HDA9-PWR deacetylation complex & original description: none


Gene families : OG0001343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08924
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00114900 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.09 OrthoFinder output from all 47 species
Adi_g012037 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Adi_g093352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04199 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Aev_g14184 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ala_g11479 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Ala_g19843 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Aop_g19007 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029801 No alias lysine-rich arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0118.g046625 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Cba_g09126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71610 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.14G077400.1 Ceric.14G077400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.15G065000.1 Ceric.15G065000 component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Ceric.38G019400.1 Ceric.38G019400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Cre06.g264400 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Dac_g39968 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g04157 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g17925 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder output from all 47 species
Gb_00676 No alias component PWR of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species
Gb_13421 No alias component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g03550.1 LOC_Os05g03550 component PWR of HDA9-PWR deacetylation complex 0.1 OrthoFinder output from all 47 species
Len_g21112 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Len_g59754 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g06278 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g09069 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
MA_104862g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
MA_12404g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
MA_9049830g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
Mp1g21450.1 No alias component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
Msp_g19128 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Nbi_g06341 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Pir_g13639 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Pp3c11_8790V3.1 Pp3c11_8790 Duplicated homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g13727 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Solyc04g049120.4.1 Solyc04g049120 component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
Spa_g18287 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Tin_g24813 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e027573_P003 Zm00001e027573 component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 1019 1061
IPR001005 SANT/Myb 1278 1319
No external refs found!