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  5. Sam_g08854

Sam_g08854


Description : not classified & original description: none


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08854
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Als_g06424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16547.t1 Aspi01Gene16547 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16561.t1 Aspi01Gene16561 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16562.t1 Aspi01Gene16562 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20523.t1 Aspi01Gene20523 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70952.t1 Aspi01Gene70952 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.125 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g08103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18516 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Gb_27685 KEG Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Gb_30943 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g16877 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g26049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g42354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008892 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sam_g11584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g50011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011646 KAP_P-loop 122 164
IPR011646 KAP_P-loop 20 89
No external refs found!