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  5. Sam_g08828

Sam_g08828


Description : splicing factor *(CFM9) & original description: none


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08828
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00218010 evm_27.TU.AmTr_v1... Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
AT4G13070 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.02 OrthoFinder output from all 47 species
Als_g11882 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04012 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G126500.1 Ceric.01G126500 splicing factor *(CFM9) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g11683 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
MA_10427237g0020 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
MA_10436523g0010 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
Pir_g19431 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015065 No alias splicing factor *(CFM9) & original description: CDS=69-1580 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017803 No alias splicing factor *(CFM9) & original description: CDS=100-1332 0.03 OrthoFinder output from all 47 species
Spa_g10764 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19478 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027517_P001 Zm00001e027517 Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 159 242
No external refs found!