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  5. Sam_g08662

Sam_g08662


Description : not classified & original description: none


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08662

Target Alias Description ECC score Gene Family Method Actions
AT1G80720 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Adi_g108141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55086.t1 Aspi01Gene55086 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0174.g055935 No alias not classified & original description: CDS=174-1004 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056596 No alias not classified & original description: CDS=77-799 0.03 OrthoFinder output from all 47 species
Cba_g25289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g41118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006985 No alias not classified & original description: CDS=139-606 0.03 OrthoFinder output from all 47 species
Solyc03g117080.4.1 Solyc03g117080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g065800.3.1 Solyc06g065800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g06431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 54 255
No external refs found!