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  5. Sam_g08552

Sam_g08552


Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0000319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08552

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00123590 evm_27.TU.AmTr_v1... DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Adi_g023432 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16895 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11938 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g50857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47647.t1 Aspi01Gene47647 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05186 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000525.11 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Ehy_g32081 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11055 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03895 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22566 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13710 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06865 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04336 No alias co-chaperone *(Hsp40) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002939 DnaJ_C 166 324
IPR001623 DnaJ_domain 4 67
No external refs found!