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  5. Sam_g08474

Sam_g08474


Description : guanine nucleotide dissociation inhibitor *(RopGDI) & original description: none


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08474
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00173830 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00174290 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
AT3G07880 SCN1 Immunoglobulin E-set superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g16933 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Als_g00548 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Als_g15235 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04303.t1 SCN1, Aspi01Gene04303 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23920.t1 SCN1, Aspi01Gene23920 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41261.t1 SCN1, Aspi01Gene41261 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.05 OrthoFinder output from all 47 species
Cba_g15388 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Ceric.31G032800.1 SCN1, Ceric.31G032800 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Dcu_g00737 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Dde_g13147 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Ehy_g04328 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.05 OrthoFinder output from all 47 species
LOC_Os06g21340.1 SCN1, LOC_Os06g21340 guanine nucleotide dissociation inhibitor (RopGDI) 0.01 OrthoFinder output from all 47 species
Len_g38538 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Lfl_g37795 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Lfl_g38013 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.07 OrthoFinder output from all 47 species
MA_205752g0010 SCN1 guanine nucleotide dissociation inhibitor (RopGDI) 0.04 OrthoFinder output from all 47 species
MA_9483417g0010 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Mp2g06810.1 SCN1 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Msp_g21563 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.07 OrthoFinder output from all 47 species
Nbi_g29800 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Ppi_g00513 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006319 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011233 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023612 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.06 OrthoFinder output from all 47 species
Sam_g50701 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Solyc11g012270.2.1 SCN1, Solyc11g012270 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Spa_g09684 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Zm00001e015664_P002 SCN1, Zm00001e015664 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0007266 Rho protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR000406 Rho_GDI 95 279
No external refs found!