Sam_g08470

Description : EC_2.4 glycosyltransferase & original description: none

Gene families : OG0000340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g08470

Target	Alias	Description	ECC score	Gene Family Method
AT1G06410	TPS7, ATTPS7, ATTPSA	trehalose-phosphatase/synthase 7	0.03	OrthoFinder output from all 47 species
Azfi_s0114.g046058	ATTPS9, TPS9	not classified & original description: CDS=1-696	0.03	OrthoFinder output from all 47 species
Cba_g06559	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g02339	TPS6, ATTPS6	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06183	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07922	TPS6, ATTPS6	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g06219	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09360	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04631	TPS6, ATTPS6	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g05913	TPS6, ATTPS6	EC_2.4 glycosyltransferase & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019047	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: CDS=116-2665	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023167	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: CDS=1-2628	0.03	OrthoFinder output from all 47 species
Sam_g19392	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo184345	ATTPS5, TPS5	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5...	0.02	OrthoFinder output from all 47 species
Tin_g26291	ATTPS5, TPS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004224_P001	ATTPS9, TPS9,...	Probable alpha,alpha-trehalose-phosphate synthase...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0005991	trehalose metabolic process	None	Extended
BP	GO:0005992	trehalose biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009312	oligosaccharide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0046351	disaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003883	CTP synthase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001830	Glyco_trans_20	61	544
IPR003337	Trehalose_PPase	594	827

External Links

No external refs found!

Sam_g08470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation