Sam_g08461

Description : EC_6.4 ligase forming carbon-carbon bond & original description: none

Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g08461

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00101p00077050	CAC2,...	Lipid metabolism.fatty acid synthesis.acetyl-CoA...	0.02	OrthoFinder output from all 47 species
AT5G35360	CAC2	acetyl Co-enzyme a carboxylase biotin carboxylase subunit	0.03	OrthoFinder output from all 47 species
Adi_g025550	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g04688	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g05185	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.04	OrthoFinder output from all 47 species
Ceric.06G084300.1	CAC2, Ceric.06G084300	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Dcu_g01546	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.02	OrthoFinder output from all 47 species
Dde_g04846	CAC2	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01001194001	MCCA	Amino acid metabolism.degradation.branched-chain amino...	0.03	OrthoFinder output from all 47 species
Gb_20361	CAC2	biotin carboxylase subunit of polymeric acetyl-CoA...	0.03	OrthoFinder output from all 47 species
Mp6g09060.1	CAC2	biotin carboxylase subunit of polymeric acetyl-CoA...	0.02	OrthoFinder output from all 47 species
Pnu_g08042	MCCA	EC_6.4 ligase forming carbon-carbon bond & original...	0.03	OrthoFinder output from all 47 species
Solyc01g008330.4.1	CAC2, Solyc01g008330	biotin carboxylase subunit of polymeric acetyl-CoA...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005482	Biotin_COase_C	423	529
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	202	409
IPR005481	BC-like_N	90	197

External Links

No external refs found!

Sam_g08461

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation