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  5. Sam_g08455

Sam_g08455


Description : not classified & original description: none


Gene families : OG0002305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08455

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00210260 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G15900 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.06 OrthoFinder output from all 47 species
Als_g20594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G036500.1 Ceric.02G036500 not classified & original description: pacid=50584460... 0.03 OrthoFinder output from all 47 species
Dcu_g14767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017080001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031845001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g50660.1 LOC_Os05g50660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g06040.1 LOC_Os11g06040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g14211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004282 No alias not classified & original description: CDS=414-3341 0.04 OrthoFinder output from all 47 species
Solyc12g044220.3.1 Solyc12g044220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024629_P003 Zm00001e024629 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032556_P002 Zm00001e032556 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 544 620
IPR003114 Phox_assoc 110 285
IPR013937 Sorting_nexin_C 812 939
No external refs found!