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  5. Sam_g08330

Sam_g08330


Description : EC_1.6 oxidoreductase acting on NADH or NADPH & original description: none


Gene families : OG0004674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004674_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08330

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene14502.t1 Aspi01Gene14502 component *(TAH18) of cytosolic CIA system assembly... 0.02 OrthoFinder output from all 47 species
Pir_g17128 No alias component *(TAH18) of cytosolic CIA system assembly... 0.03 OrthoFinder output from all 47 species
Solyc02g085820.3.1 Solyc02g085820 component TAH18 of cytosolic CIA system assembly phase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001433 OxRdtase_FAD/NAD-bd 500 614
IPR003097 CysJ-like_FAD-binding 253 467
IPR008254 Flavodoxin/NO_synth 39 176
No external refs found!