Sam_g08317


Description : not classified & original description: none


Gene families : OG0000975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08317
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00212090 evm_27.TU.AmTr_v1... TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00062p00101520 TOR1, CN, SPR2,... Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
AT5G62580 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g057696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17645 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aev_g19315 TOR1, CN, SPR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04964 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aop_g17812 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50709.t1 TOR1, CN, SPR2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11345 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Dcu_g01963 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Ehy_g01590 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Ehy_g07055 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007847001 No alias TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037609001 No alias Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
Gb_05823 No alias TORTIFOLIA1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g50640.1 LOC_Os02g50640 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13600.1 LOC_Os06g13600 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g33630.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
Len_g03903 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Lfl_g03452 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Lfl_g11054 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
MA_102352g0010 TOR1, CN, SPR2 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_185230g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_20584g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g24000.1 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
Nbi_g11697 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Pir_g10451 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Pir_g22595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09419 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ppi_g09251 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ppi_g31226 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018881 TOR1, CN, SPR2 not classified & original description: CDS=806-3748 0.03 OrthoFinder output from all 47 species
Solyc07g042580.3.1 Solyc07g042580 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g006350.3.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species
Spa_g01750 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Spa_g17868 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Tin_g13606 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Zm00001e034876_P002 Zm00001e034876 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA

No InterPro domains available for this sequence

No external refs found!