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  5. Sam_g08284

Sam_g08284


Description : transcriptional co-regulator *(ZPR) & original description: none


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08284

Target Alias Description ECC score Gene Family Method Actions
Als_g33687 HB-8, ATHB8, ATHB-8 HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008557 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046826 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Cba_g23018 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60655 ICU4, ATHB15,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47759 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_22761 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
LOC_Os03g01890.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
MA_10425826g0010 HB-8, ATHB8, ATHB-8 Homeobox-leucine zipper protein HOX32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_110407g0010 HB-8, ATHB8, ATHB-8 Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_112057g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
MA_19520g0020 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Ore_g26455 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g120910.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR013978 MEKHLA 699 841
IPR002913 START_lipid-bd_dom 177 383
IPR001356 Homeobox_dom 19 76
No external refs found!