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  5. Sam_g08137

Sam_g08137


Description : substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0006597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000663.18 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g226450 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Dac_g06482 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Mp1g17450.1 No alias component Prp17 of non-snRNP MOS4-associated complex 0.04 OrthoFinder output from all 47 species
Nbi_g07083 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo78344 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 OrthoFinder output from all 47 species
Spa_g07836 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 410 446
IPR001680 WD40_repeat 543 580
IPR001680 WD40_repeat 282 318
IPR001680 WD40_repeat 323 361
IPR001680 WD40_repeat 502 537
No external refs found!